Coordinates based on model sequence from Soh et al 2014: Sequencing the mouse Y chromosome reveals convergent gene acquisition and amplification on both sex chromosomes
Zfy1	365207	437409	F
Ube1y	458713	484224	R
Kdm56	537788	583811	R
Eif2s3y	650612	668594	R
Uty	737144	885738	F
Ddx3y	900715	926613	F
Usp9y	938961	1099782	F
ZFY2	1746262	1810496	F
H2aly	2239186	2239521	R
Sry	2302558	2303745	F
H2aly	2360426	2360761	F
Rbmy	2425256	2436292	F
Rbmy	2470786	2481941	R
Rbmy	2502245	2513579	R
Rbmy	2541095	2552293	R
Rbmy	2799097	2810057	R
Rbmy	2830481	2842098	R
Rbmy	2863935	2882495	R
Rbmy	2902815	2914269	R
Rbmy	3161779	3173354	R
Sly	4109126	4133588	F
Srsy	4281497	4282589	F
Ssty2	4385531	4386214	R
Srsy	4588436	4589528	F
Ssty1	4998819	4999501	R
Ssty2	5067558	5068241	R
Ssty2	5134971	5135654	R
Ssty1	5284272	5284954	R
Ssty1	5608787	5609469	R
Sly	5925017	5955379	R
Ssty1	6020628	6021304	F
Ssty2	6256473	6257156	F
Ssty2	6507133	6507816	F
Sly	6595259	6619864	R
Ssty2	6976329	6977012	F
Sly	7064444	7089072	R
Ssty2	7335036	7335719	F
Ssty2	7409379	7410062	F
Srsy	7524423	7525514	R
Sly	7599385	7623982	R
Ssty2	8173020	8173703	F
Srsy	8350699	8351790	R
Ssty2	8471766	8472449	F
Ssty2	8540024	8540707	F
Ssty2	8685035	8685718	F
Ssty1	8753721	8754403	F
Ssty2	9123444	9124127	R
Ssty2	9405862	9406545	F
Ssty1	9484941	9485623	F
Ssty2	9662815	9663498	F
Sly	9754229	9784554	R
Ssty1	9873810	9874492	F
Ssty1	10090208	10090890	F
Ssty2	10538119	10538805	F
Ssty2	11689151	11689834	R
Ssty2	11870063	11870746	R
Rbm31y	11994519	11995583	R
Ssty1	12350399	12351072	R
Ssty1	12469347	12470029	R
Ssty1	12559779	12560461	R
Ssty1	12683750	12684432	R
Ssty1	12801412	12802094	R
Sly	13089250	13119544	R
Ssty1	13216129	13216811	F
Ssty1	13335486	13336168	F
Srsy	13577116	13578208	R
Sly	13707902	13732373	R
Ssty2	14107508	14108191	F
Sly	14462431	14493098	R
Ssty2	15188330	15189016	F
Ssty2	16365850	16366533	R
Ssty2	16546767	16547450	R
Rbm31y	16672056	16673120	R
Ssty1	17028507	17029180	R
Ssty1	17147348	17148030	R
Ssty1	17237771	17238453	R
Ssty1	17361727	17362409	R
Ssty1	17479397	17480079	R
Sly	17767118	17797414	R
Ssty1	17893988	17894670	F
Ssty1	18013392	18014074	F
Srsy	18254456	18255548	R
Sly	18385265	18409735	R
Ssty2	18785170	18785853	F
Sly	19140110	19170767	R
Srsy	19818998	19820090	R
Srsy	19885831	19886923	R
Sly	19969658	20000062	R
Sly	20238515	20263095	F
Srsy	20336951	20338042	F
Ssty1	20367740	20368422	R
Ssty2	20436925	20437608	R
Ssty2	20513934	20514617	R
Srsy	20634485	20635576	F
Sly	20758745	20783222	F
Srsy	20857000	20858091	F
Ssty1	20890570	20891252	R
Srsy	21171574	21172665	F
Sly	21291638	21316224	F
Srsy	21389802	21390893	F
Ssty2	21636145	21636828	R
Ssty2	21710696	21711379	R
Srsy	21832385	21833476	F
Sly	21957567	21982133	F
Srsy	22056021	22057112	F
Ssty1	22087072	22087754	R
Ssty2	22153520	22154203	R
Ssty2	22220150	22220833	R
Ssty1	22362543	22363225	R
Ssty2	22429052	22429735	R
Ssty2	22503789	22504472	R
Srsy	22634955	22636046	F
Sly	22754965	22779550	F
Srsy	22853348	22854439	F
Ssty1	22884371	22885053	R
Ssty2	22950762	22951445	R
Srsy	23146975	23148066	F
Sly	23270926	23295456	F
Srsy	23364211	23365302	F
Ssty2	23464029	23464712	R
Ssty2	23538794	23539477	R
Srsy	23660112	23661203	F
Sly	23784072	23808602	F
Srsy	23877379	23878470	F
Ssty2	23977152	23977835	R
Ssty2	24051833	24052516	R
Srsy	24173177	24174268	F
Sly	24297156	24321712	F
Srsy	24390496	24391587	F
Ssty2	24490288	24490971	R
Ssty2	24564928	24565611	R
Srsy	24686258	24687349	F
Sly	24810218	24834745	F
Srsy	24903552	24904643	F
Ssty2	25003369	25004052	R
Ssty2	25078058	25078741	R
Srsy	25199395	25200486	F
Sly	25323384	25347909	F
Srsy	25416704	25417795	F
Ssty2	25516455	25517138	R
Ssty2	25591061	25591744	R
Srsy	25706337	25707428	F
Sly	25833038	25857627	F
Srsy	25931458	25932549	F
Ssty1	25963362	25964044	R
Ssty2	26029781	26030464	R
Srsy	26161775	26162866	F
Ssty2	26261525	26262208	R
Ssty2	26336153	26336836	R
Srsy	26451430	26452521	F
Sly	26578159	26602748	F
Srsy	26676572	26677663	F
Ssty1	26708471	26709153	R
Ssty2	26774865	26775548	R
Srsy	26906773	26907864	F
Ssty2	27006555	27007238	R
Ssty2	27081077	27081760	R
Srsy	27201083	27202174	F
Sly	27327783	27352338	F
Srsy	27426166	27427257	F
Ssty2	27525987	27526670	R
Ssty2	27600532	27601215	R
Srsy	27720611	27721702	F
Ssty2	27815752	27816435	R
Srsy	27941799	27942891	F
Srsy	28290109	28291201	R
Srsy	28359470	28360562	R
Sly	28434076	28458478	R
Sly	28735219	28765647	F
Srsy	28846824	28847916	F
Ssty2	29179465	29180148	F
Srsy	29225929	29227021	R
Ssty2	29443042	29443725	F
Srsy	29493920	29495012	R
Sly	29581396	29605813	R
Sly	29788990	29819407	F
Srsy	29909222	29910314	F
Srsy	29976604	29977696	F
Ssty2	30314247	30314930	F
Srsy	30360796	30361888	R
Sly	30455656	30480074	R
Sly	30685180	30715600	F
Srsy	30805428	30806520	F
Srsy	30872825	30873917	F
Ssty2	31206421	31207104	F
Srsy	31251768	31252860	R
Srsy	31314199	31315291	R
Srsy	31375492	31376584	R
Sly	31462497	31486919	R
Sly	31670899	31701319	F
Srsy	31782160	31783252	F
Srsy	31849888	31850980	F
Ssty2	32187512	32188195	F
Srsy	32234060	32235152	R
Sly	32328829	32353254	R
Sly	32593706	32624145	F
Srsy	32705268	32706360	F
Srsy	32773084	32774176	F
Ssty2	33110587	33111270	F
Srsy	33157157	33158249	R
Srsy	33219368	33220460	R
Srsy	33279894	33280986	R
Sly	33367454	33399000	R
Ssty2	33569220	33569903	R
Ssty2	33644120	33644803	R
Ssty2	33863512	33864195	R
Sly	34188267	34212813	F
Srsy	34286729	34287820	F
Ssty1	34317757	34318439	R
Ssty2	34383672	34384355	R
Ssty1	34585479	34586161	R
Ssty2	34651895	34652578	R
Ssty2	34726586	34727269	R
Srsy	34857816	34858907	F
Sly	34977938	35002533	F
Srsy	35076968	35078059	F
Ssty1	35107595	35108277	R
Ssty2	35174004	35174687	R
Srsy	35369166	35370257	F
Sly	35493118	35517807	F
Srsy	35591659	35592750	F
Sly	35736652	35761240	F
Srsy	35835048	35836139	F
Ssty1	35867134	35867816	R
Ssty2	35932672	35933355	R
Ssty2	36072967	36073650	R
Sly	36205974	36230560	F
Srsy	36304338	36305429	F
Ssty1	36336417	36337099	R
Ssty2	36402844	36403527	R
Sly	36654382	36679000	F
Srsy	36758068	36759159	F
Ssty1	36790427	36791109	R
Ssty2	36857001	36857684	R
Ssty2	36931692	36932375	R
Srsy	37053023	37054114	F
Ssty2	37145443	37146126	R
Ssty2	37220176	37220859	R
Sly	37448685	37473257	F
Srsy	37547028	37548119	F
Ssty1	37578110	37578792	R
Ssty2	37645759	37646442	R
Ssty2	37720076	37720759	R
Sly	37747359	37771803	F
Srsy	37858183	37859275	F
Srsy	38434666	38435758	R
Srsy	38487550	38488642	R
Sly	38562181	38586628	R
Sly	39263410	39287898	F
Srsy	39352855	39353947	F
Srsy	39417530	39418622	F
Ssty1	39654470	39655152	R
Ssty1	39778955	39779637	R
Sly	39877694	39908027	F
Sly	40216027	40246854	R
Ssty1	40347980	40348662	F
Sly	40591783	40616228	F
Srsy	40689672	40690764	F
Ssty2	41051911	41052594	F
Sly	41522456	41553017	F
Ssty2	41707532	41708215	F
Srsy	41754046	41755138	R
Srsy	41816426	41817518	R
Sly	41903940	41928356	R
Sly	42113507	42144002	F
Ssty2	42343534	42344217	R
Srsy	42437057	42438149	F
Ssty2	42487934	42488617	R
Srsy	42825908	42827000	R
Sly	42925814	42950258	R
Sly	43204547	43235257	F
Srsy	43308882	43309974	F
Ssty2	43730210	43730893	F
Ssty2	43952798	43953481	F
Ssty2	44358043	44358726	F
Ssty2	44725705	44726388	F
Srsy	44772199	44773291	R
Srsy	44834590	44835682	R
Sly	44922047	44946467	R
Sly	45126375	45156843	F
Sly	45504218	45534677	R
Sly	45714539	45738948	F
Ssty2	45779048	45779731	R
Srsy	45882424	45883516	F
Srsy	45944844	45945936	F
Ssty2	45991848	45992531	R
Srsy	46324367	46325459	R
Srsy	46391729	46392821	R
Sly	46473932	46504347	R
Sly	46688263	46712683	F
Srsy	46802320	46803412	F
Srsy	46866742	46867834	F
Ssty2	46913789	46914472	R
Srsy	47252651	47253743	R
Sly	47334825	47365229	R
Sly	47549167	47573574	F
Ssty2	47616355	47617038	F
Ssty2	47691213	47691896	F
Srsy	47796865	47797956	R
Sly	47879261	47903777	R
Ssty2	48203635	48204318	F
Ssty2	48278276	48278959	F
Ssty1	48344832	48345514	F
Srsy	48375107	48376198	R
Sly	48450097	48474762	R
Srsy	48598583	48599674	R
Ssty2	48720459	48721142	F
Ssty2	48795056	48795739	F
Srsy	48894709	48895800	R
Sly	48974806	48999464	R
Srsy	49122570	49123661	R
Ssty2	49238002	49238685	F
Ssty2	49312706	49313389	F
Ssty1	49379057	49379739	F
Srsy	49410514	49411605	R
Sly	49487191	49511796	R
Ssty2	49757706	49758389	F
Ssty2	49832378	49833061	F
Ssty1	49898640	49899322	F
Srsy	49929087	49930178	R
Sly	50004162	50028816	R
Ssty2	50268692	50269375	F
Srsy	50361499	50362590	R
Ssty2	50483340	50484023	F
Ssty2	50558026	50558709	F
Srsy	50655966	50657057	R
Sly	50731010	50755585	R
Ssty2	51095875	51096558	F
Ssty1	51162304	51162986	F
Ssty2	51441566	51442249	F
Ssty1	51508859	51509541	F
Srsy	51540357	51541448	R
Sly	51615376	51639986	R
Srsy	51762984	51764075	R
Ssty2	51884761	51885444	F
Ssty2	51959479	51960162	F
Ssty1	52025815	52026497	F
Srsy	52056490	52057581	R
Ssty2	52175532	52176215	F
Ssty2	52250062	52250745	F
Ssty1	52319363	52320045	F
Srsy	52349991	52351082	R
Ssty1	52615497	52616179	F
Sly	52679329	52703815	R
Srsy	52823264	52824355	R
Ssty2	53019786	53020469	F
Ssty2	53248634	53249317	F
Ssty2	53322927	53323610	F
Srsy	53420062	53421153	R
Sly	53490667	53515261	R
Srsy	53641668	53642759	R
Ssty2	53802552	53803235	F
Ssty2	53877119	53877802	F
Srsy	53973900	53974991	R
Sly	54048928	54073474	R
Srsy	54196298	54197389	R
Ssty2	54317101	54317784	F
Ssty2	54391458	54392141	F
Sly	54566963	54591510	R
Srsy	54655469	54656560	R
Ssty2	54852034	54852717	F
Ssty2	55083251	55083934	F
Ssty2	55157418	55158101	F
Srsy	55254583	55255674	R
Sly	55336096	55360704	R
Srsy	55495363	55496454	R
Ssty2	55656273	55656956	F
Ssty2	55732671	55733354	F
Srsy	55829419	55830510	R
Sly	55904451	55929000	R
Srsy	56051873	56052964	R
Ssty2	56173086	56173769	F
Ssty2	56247356	56248039	F
Sly	56422906	56447536	R
Srsy	56733088	56734180	F
Ssty2	57065657	57066340	F
Srsy	57112352	57113444	R
Srsy	57176757	57177849	R
Sly	57271254	57295658	R
Sly	57479584	57510001	F
Srsy	57599900	57600992	F
Srsy	57666138	57667230	F
Srsy	57732454	57733546	F
Sly	58093481	58123999	R
Sly	58303722	58328158	F
Srsy	58419858	58420950	F
Srsy	58481608	58482700	F
Ssty2	58528575	58529258	R
Srsy	58857235	58858327	R
Sly	58939426	58969864	R
Sly	59153855	59178276	F
Srsy	59267928	59269020	F
Srsy	59332347	59333439	F
Ssty2	59379381	59380064	R
Srsy	59718258	59719350	R
Sly	59800429	59830829	R
Sly	60014767	60039173	F
Ssty2	60081952	60082635	F
Ssty2	60156805	60157488	F
Srsy	60262539	60263630	R
Sly	60344923	60369438	R
Ssty2	60642519	60643202	F
Ssty2	60717175	60717858	F
Ssty1	60783735	60784417	F
Srsy	60814010	60815101	R
Sly	60889055	60913722	R
Srsy	61037547	61038638	R
Ssty2	61159425	61160108	F
Ssty2	61234028	61234711	F
Srsy	61333694	61334785	R
Sly	61413788	61438443	R
Srsy	61561538	61562629	R
Ssty2	61677262	61677945	F
Ssty2	61751969	61752652	F
Ssty1	61818316	61818998	F
Srsy	61849773	61850864	R
Sly	61926617	61951233	R
Ssty2	62197695	62198378	F
Ssty2	62272366	62273049	F
Ssty1	62338614	62339296	F
Srsy	62369061	62370152	R
Sly	62444134	62468787	R
Ssty2	62708663	62709346	F
Srsy	62801455	62802546	R
Ssty2	62923298	62923981	F
Ssty2	62998141	62998824	F
Srsy	63095845	63096936	R
Sly	63170902	63195483	R
Ssty2	63554808	63555491	F
Ssty1	63621213	63621895	F
Sly	63738896	63763566	F
Ssty2	63900514	63901197	F
Ssty1	63967782	63968464	F
Srsy	63999279	64000370	R
Sly	64074299	64098910	R
Srsy	64221903	64222994	R
Ssty2	64343688	64344371	F
Ssty2	64418423	64419106	F
Ssty1	64484755	64485437	F
Srsy	64515425	64516516	R
Ssty2	64634468	64635151	F
Ssty2	64709001	64709684	F
Ssty1	64778303	64778985	F
Srsy	64808923	64810014	R
Ssty1	65074451	65075133	F
Srsy	65282221	65283312	R
Ssty2	65478555	65479238	F
Ssty2	65709763	65710446	F
Ssty2	65784511	65785194	F
Ssty2	66077817	66078500	F
Ssty1	66144356	66145038	F
Srsy	66221841	66222932	F
Sly	66345479	66370111	F
Srsy	66595732	66596823	F
Ssty2	66687480	66688163	R
Ssty2	66762180	66762863	R
Srsy	66883838	66884929	F
Sly	67007485	67032131	F
Srsy	67106122	67107213	F
Ssty1	67137002	67137684	R
Ssty2	67203506	67204189	R
Ssty2	67278110	67278793	R
Sly	67545430	67569958	F
Srsy	67650366	67651457	F
Ssty2	67756462	67757145	R
Ssty2	67831445	67832128	R
Srsy	67952706	67953797	F
Ssty2	68091248	68091931	R
Ssty2	68313473	68314156	F
Srsy	68478030	68479121	R
Ssty2	68670514	68671197	F
Ssty2	68884488	68885171	F
Ssty2	68959079	68959762	F
Ssty1	69025578	69026260	F
Srsy	69055855	69056946	R
Sly	69130927	69155602	R
Srsy	69271582	69272673	R
Ssty2	69393777	69394460	F
Ssty2	69468349	69469032	F
Srsy	69566889	69567980	R
Sly	69647002	69671667	R
Srsy	69794650	69795741	R
Ssty2	69910953	69911636	F
Ssty2	69985597	69986280	F
Ssty1	70051958	70052640	F
Srsy	70083450	70084541	R
Sly	70158493	70183066	R
Srsy	70306174	70307265	R
Sly	70381084	70405662	R
Ssty2	70726640	70727323	F
Ssty1	70791035	70791717	F
Sly	70908692	70933343	F
Ssty2	71070210	71070893	F
Ssty1	71137427	71138109	F
Srsy	71168917	71170008	R
Sly	71243893	71268503	R
Srsy	71385445	71386536	R
Ssty2	71507294	71507977	F
Ssty2	71582168	71582851	F
Ssty2	71655673	71656356	F
Ssty1	71722104	71722786	F
Ssty2	71926868	71927551	F
Ssty2	72001476	72002159	F
Ssty1	72070944	72071626	F
Srsy	72101563	72102654	R
Ssty2	72223194	72223877	F
Ssty1	72294522	72295204	F
Sly	72358367	72382937	R
Srsy	72502375	72503466	R
Ssty2	72699124	72699807	F
Ssty2	72987859	72988542	F
Ssty1	73054447	73055129	F
Srsy	73085101	73086192	R
Sly	73159585	73184410	R
Srsy	73311543	73312634	R
Ssty2	73476610	73477293	F
Ssty2	73638302	73638985	F
Ssty2	73713039	73713722	F
Srsy	73809893	73810984	R
Sly	73884915	73909510	R
Srsy	74032475	74033566	R
Ssty2	74153343	74154026	F
Ssty2	74227369	74228052	F
Sly	74404387	74429007	R
Srsy	74552146	74553237	R
Ssty2	74674395	74675078	F
Ssty2	74748623	74749306	F
Sly	74921709	74946309	R
Srsy	75066317	75067408	R
Ssty2	75188439	75189122	F
Ssty2	75263382	75264065	F
Srsy	75369089	75370180	R
Sly	75450663	75475188	R
Ssty2	75761701	75762384	F
Ssty2	75836395	75837078	F
Ssty1	75902896	75903578	F
Srsy	75933390	75934481	R
Sly	76008072	76032711	R
Srsy	76155225	76156316	R
Sly	76381874	76406498	R
Ssty2	76648663	76649346	F
Ssty2	76722687	76723370	F
Ssty1	76789174	76789856	F
Srsy	76827041	76828132	R
Sly	76902058	76926649	R
Srsy	77036778	77037869	R
Ssty2	77449121	77449804	F
Ssty2	77523621	77524304	F
Ssty1	77590084	77590766	F
Ssty2	77762014	77762697	F
Ssty2	77836652	77837335	F
Ssty1	77903080	77903762	F
Srsy	77933706	77934797	R
Sly	78008698	78033281	R
Srsy	78156314	78157405	R
Ssty2	78278056	78278739	F
Ssty2	78352667	78353350	F
Ssty2	78646178	78646861	F
Ssty1	78710226	78710908	F
Srsy	78748071	78749162	R
Sly	78822967	78847559	R
Srsy	78952796	78953887	R
Ssty2	79151026	79151709	F
Ssty2	79369600	79370283	F
Ssty2	79444131	79444814	F
Ssty1	79510551	79511233	F
Srsy	79541195	79542286	R
Sly	79616184	79640842	R
Srsy	79759649	79760740	R
Ssty2	79891590	79892273	F
Ssty1	80039132	80039814	F
Srsy	80072312	80073403	R
Sly	80147195	80171670	R
Srsy	80295298	80296389	R
Ssty2	80412399	80413082	F
Ssty2	80487064	80487747	F
Ssty1	80556390	80557072	F
Srsy	80587044	80588135	R
Ssty2	80707018	80707701	F
Ssty1	80850530	80851212	F
Sly	80914415	80939003	R
Srsy	81058521	81059612	R
Ssty2	81255304	81255987	F
Srsy	81352057	81353148	R
Ssty2	81474840	81475523	F
Ssty2	81549125	81549808	F
Ssty1	81615531	81616213	F
Srsy	81646164	81647255	R
Sly	81720135	81744885	R
Srsy	81868044	81869135	R
Ssty2	81975676	81976359	F
Ssty2	82049537	82050220	F
Srsy	82145487	82146578	R
Sly	82225392	82244772	R
Ssty2	82402938	82403621	F
Ssty2	82477722	82478405	F
Ssty2	82540215	82540898	F
Ssty2	82614891	82615574	F
Ssty1	82681504	82682186	F
Srsy	82711598	82712689	R
Sly	82786527	82811137	R
Srsy	82934021	82935112	R
Ssty2	83128120	83128803	F
Ssty2	83176936	83177619	F
Ssty1	83316552	83317234	F
Srsy	83347160	83348251	R
Sly	83435932	83460545	R
Srsy	83583790	83584881	R
Ssty2	83704651	83705334	F
Ssty2	83855949	83856632	F
Ssty1	83922643	83923325	F
Srsy	83981516	83982607	R
Ssty2	84141744	84142427	F
Ssty2	84216571	84217254	F
Ssty1	84283141	84283823	F
Srsy	84341999	84343090	R
Ssty2	84502139	84502822	F
Ssty2	84576875	84577558	F
Ssty1	84643478	84644160	F
Sly	84751093	84775671	R
Ssty2	85053653	85054336	F
Ssty2	85122144	85122827	F
Ssty1	85187563	85188245	F
Srsy	85216728	85217819	R
Sly	85291609	85316211	R
Ssty2	85557305	85557988	F
Ssty2	85631569	85632252	F
Ssty1	85700714	85701396	F
Srsy	85731240	85732331	R
Sly	85806165	85830653	R
Srsy	85953577	85954668	R
Ssty1	86135115	86135797	F
Srsy	86165244	86166335	R
Sly	86240312	86263428	R
Ssty2	86512821	86513504	F
Srsy	86668151	86669242	R
Sly	86742657	86767230	R
Srsy	86890763	86891854	R
Ssty1	86948234	86948916	F
Srsy	86978637	86979728	R
Ssty2	87089298	87089981	F
Sly	87223962	87248646	R
Srsy	87372899	87373990	R
Ssty2	87492709	87493392	F
Ssty1	87640318	87641000	F
Srsy	87670997	87672088	R
Sly	87742171	87766764	R
Srsy	87895085	87896176	R
Ssty2	88016726	88017409	F
Sly	88401569	88432066	F
Ssty2	88534172	88534855	R
Srsy	89008372	89009464	R
Sly	89090606	89121000	R
Sly	89187193	89218161	F
Srsy	89304629	89305721	F