Supplementary Table 8: Primers for amplification of palindrome boundaries

Palindrome Boundary Left# Left sequence Right# Right sequence Product
size
P1 inner 9867 CAGGGGCAGCATTTACAGAT 9868 GACAACACCACCGTACTCCA 484
P1 inner 9869 CAGGGGCAGCATTTACAGAT 9870 GGTCTGCTGCACCTTCATTT 422
P1 outer 10247 CCGACTTCCACAATGGCT 10248 GGGAGAAAAGTTCTGCAACG 677
P1/2 outer 10113 TGGGCGAGGACTTTATGA 10114 GGGGTCCCAGTTCCACTATT 755
P3 inner 10044 AGCTTCAAGTGATCCTCCGA 10045 CTAAGCCAGGAACTTGCCAC 412
P3 inner 10046 TCATTTGTGTCCTTCTCTTGGA 10047 CTAAGCCAGGAACTTGCCAC 453
P4 outer 10253 GGCTTAAACTTGGGAGGGTG 10254 CAAAGAGCCTCCCAGACCA 640
P4 outer 10251 CTGTCTGTTTTTGGGTGGGA 10252 ATAGCAAAGAGCCTCCCAGA 643
P4 inner 9859 GTCAGGAGGCTTAGGAAGGC 9860 CTGGGATTACTGGCAAGGAC 302
P4 inner 9861 GTGCTGTTAAGCACCATCCA 9862 CTGGGATTACTGGCAAGGAC 318
P5 inner 10082 GCAAAGTTCTTGCACTGTGTTT 10083 TTGTGGCCTGTGGTGTAGAA 318
P5 inner 10084 GCAAAGTTCTTGCACTGTGTTT 10085 GCAGGATTAGTCAATCATGGAA 372
P5 outer 10255 GGCTTAAACTTGGGAGGGTG 10256 GCACTTCAAACCGAGGCTTA 790
P5 outer 10253 GGCTTAAACTTGGGAGGGTG 10254 CAAAGAGCCTCCCAGACCA 640
P6 inner 9943 CCTATCTCTGCATGGCCTGT 9946 AAGGCAAGTTTTGGAGCAGA 428
P6 inner 9945 ATCTCACATGGTGCCAGACA 9946 AAGGCAAGTTTTGGAGCAGA 343
P6 outer 10070 TGCACTTGTAGGAATTTGGA 10071 AAAACAGACATATATACACATACACTG 403
P6 outer 10072 TTGCAACATTGCACTTGTAGG 10073 ATGATTCTGGTCTTGGTGCC 402
P7 inner 11910 TCCAAGCATATAGTTGCCCC 11911 TCTTTCACTGCACATGGAGC 438
P7 inner 11916 AGAAAACTTGCAATGCAGGAG 11917 ACTGCACCAACAAATGCTCA 439
P7 outer 11904 GGCCCCGTAGGTCTATACAA 11905 GGTCATGACTTGCCATGTTG 500
P7 outer 11906 GCTCCACATTAGAATGACCCA 11907 GGAAAAATATTGTGACCCCCA 432
P8 inner 10058 TGAAATGTAAAACCGTGGACA 10059 TGGGGAACGTTGCCTAAC 335
P8 inner 10060 ATCTAGAATTGGGCCTTGCC 10061 TGGGGAACGTTGCCTAAC 349
P8 outer 10054 TTTTTCTTGCAATCCTGCC 9852 CTCTTTTTGCCTGTGAACCA 714
P8 outer 10056 AGGGTCCCCTCCCTACAAT 9854 GCATGAGTTATTCAGCCCGT 659
IR3 inner 10321 CGTCGGTATTTTACGACACG 10322 GCATTTGTTTTTCATGTGCG 585
IR3 inner 10323 ATCTGCACACTTGGGTAGGC 10324 GAGGAAATGCAGAATTTGGG 493
IR3 outer 10325 GCTACTTGTGAATCACGCCA 10326 TGCATATTTCGAAGCATTGTC 500
IR3 outer 10327 AGGCTACTGTGAATCACGCC 10328 GTGCATGTGTTCCCTTTGTG 508