Palindrome and amplicon boundary positions in AZFc and the 
surrounding region of the human Y chromosome (sequence in 
file AZFc_sequence).

Supplementary information for T.Kuroda-Kawaguchi et al.,
"The AZFc region of the Y chromosome features massive
palindromes and uniform recurrent deletions in infertile
men", Nature Genetics 2001.

October 4, 2001
            			approximate
boundary name                   position
-------------  			--------

P2 proximal inner boundary	1380885
P2 distal inner boundary	1383024
P1 proximal inner boundary	2995270
P1 distal inner boundary	2997409
P3 proximal inner boundary	380076
P3 distal inner boundary	550364
P1.1 proximal outer boundary	3704360
P1.1 distal outer boundary	3728163
P1.2 proximal outer boundary	2287343
P1.2 distal outer boundary	2311145
P1.1 proximal inner boundary	2297268
P1.1 distal inner boundary	2301215
P1.2 proximal inner boundary	3714285
P1.2 distal inner boundary	3718232
u1/b1 boundary          	96220
b1/t1 boundary           	264405
t2/b2 boundary             	666022
b2/u3 boundary           	894825
u3/g1 boundary            	919361
g1/r1 boundary            	1234082
g2/r3 boundary           	2867828
r4/g3 boundary           	3147646
r2/gray boundary        	1531975
b3/yellow boundary      	1875466
yellow/b4 boundary          	4139974
yellow/g2 boundary        	2553130
g3/yellow boundary      	3462374
gray/white boundary       	4484303	
Boundary of r1 chr3 insertion	1246058
Boundary of r2 chr3 insertion	1520012	
Boundary of r3 chr3 insertion	2879802
Boundary of r4 chr3 insertion	3135671
Chr1 insertion boundary in proximal gray sequence	1631841
Chr1 proximal insertion boundary in distal gray sequence	4384137
Chr1 distal insertion boundary in distal gray sequence	4512304
Chr15 insertion boundary in proximal yellow sequence	2422439
Chr15 insertion boundary in distal yellow sequence	3593070
Proximal boundary of Yp/Yq common sequence	864517
Distal boundary of Yp/Yq common sequence	926957
Distal outer boundary of P3           	834178
gray/b3 boundary                        	1646710
b4/gray boundary                          	4369267